MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,317
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 47
misc RNA:
Total features: 2,368
Total number of protein coding genes annotated/found:
2,317
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5039|JADGLG010000010.1
SEQF5039_00024
Genome Viewer
NA
AA
468/156
2587-2120
Transcriptional repressor NrdR
SEQF5039|JADGLG010000010.1
SEQF5039_00025
Genome Viewer
NA
AA
510/170
3527-3018
4-hydroxyphenylacetate 3-monooxygenase reductase component
SEQF5039|JADGLG010000010.1
SEQF5039_00026
Genome Viewer
NA
AA
444/148
3979-3536
HTH-type transcriptional regulator FarR
SEQF5039|JADGLG010000010.1
SEQF5039_00027
Genome Viewer
NA
AA
2427/809
6896-4470
Penicillin-binding protein 1A
SEQF5039|JADGLG010000010.1
SEQF5039_00028
Genome Viewer
NA
AA
1098/366
7047-8144
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00029
Genome Viewer
NA
AA
609/203
8146-8754
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00030
Genome Viewer
NA
AA
642/214
8758-9399
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00031
Genome Viewer
NA
AA
531/177
9417-9947
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00032
Genome Viewer
NA
AA
2172/724
9962-12133
Type IV pilus biogenesis and competence protein PilQ
SEQF5039|JADGLG010000010.1
SEQF5039_00033
Genome Viewer
NA
AA
552/184
12208-12759
Shikimate kinase 1
SEQF5039|JADGLG010000010.1
SEQF5039_00034
Genome Viewer
NA
AA
1080/360
12927-14006
3-dehydroquinate synthase
SEQF5039|JADGLG010000010.1
SEQF5039_00035
Genome Viewer
NA
AA
1512/504
14686-16197
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00036
Genome Viewer
NA
AA
1050/350
17684-16635
Bis(5'-nucleosyl)-tetraphosphatase%2C symmetrical
SEQF5039|JADGLG010000010.1
SEQF5039_00037
Genome Viewer
NA
AA
369/123
17918-18286
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00038
Genome Viewer
NA
AA
228/76
18383-18610
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00039
Genome Viewer
NA
AA
1143/381
19953-18811
Ribosomal RNA large subunit methyltransferase L
SEQF5039|JADGLG010000010.1
SEQF5039_00040
Genome Viewer
NA
AA
783/261
20856-21638
Indole-3-glycerol phosphate synthase
SEQF5039|JADGLG010000010.1
SEQF5039_00041
Genome Viewer
NA
AA
249/83
21822-22070
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00042
Genome Viewer
NA
AA
1365/455
22241-23605
hypothetical protein
SEQF5039|JADGLG010000010.1
SEQF5039_00043
Genome Viewer
NA
AA
243/81
23688-23930
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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